Biotechnology and Bioinformatics (1+1)

10.1.8 Other database

Ens EMBL

It is a collaborative project of EMBL, EBI and the Sanger Center to automatically track sequence fragment of human genome and assemble them into longer structures.

Automated analysis methods such as: gene finding feature finding tools, sequence comparison tools, are then applied to the assembled sequences.

These are made available to users through a web interface.

Resources

1. EBI: www.ebi.ac.uk

2. NCBI: www.ncbi.nlm.nih.gov/

3. NCBI-BLAST: http://blast.ncbi.nlm.nih.gov/Blast.egi/

4. DDBJ: www.ddbj.nig.ac.jp/

5. Swiss-Prot: http://expasy.org/sprot/

6. InterPro: www.ebi.ac.uk/interpro/

7. PDB: www.pdb.org

8. CLUSTALW program:

http:// www.ebi.ac.uk/Tools/services/web/toolform.ebi?tool=clustalw2

http://align.genome.jp/clustalw/

FASTA: http:// www.ebi.ac.uk/Tools/sss/fasta/nucleotide.html